Amin Rezaei

As an intern in the Cell Migration Lab, I contributed to the development of a deep learning-backed segmentation network for the ZeroCostDL4Mic toolbox. A cloud-based platform that democratizes deep learning for the analysis of microscopy images using pre-existing free resources. My primary focus was to extend the deep learning-backed segmentation networks of the toolbox by porting the embedding-based instance segmentation in microscopy (EmbedSeg) network to the Google Colab environment and adapting it for the ZeroCostDL4Mic framework.

During my internship, I successfully achieved the following objectives:

• Developed a Jupyter notebook for the ZeroCostDL4Mic segmentation networks, specifically focusing on the EmbedSeg model. This notebook facilitates easy access and usability for researchers, even with limited technical expertise.
• Designed and implemented a user-friendly interface within Google Colab, streamlining the workflow and enhancing user experience while interacting with the EmbedSeg notebook.
• Conducted training sessions using the developed EmbedSeg notebook on a publicly available Zenodo dataset, resulting in the creation of a well-trained model for segmentation tasks.
• Ensured project documentation was comprehensive and well-structured, providing clear guidelines and instructions for effectively utilizing the EmbedSeg notebook. The emphasis was on promoting ease of use and reproducibility for other researchers and practitioners in the field.

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As an intern, I was responsible for lens preparation and quality control. My duties included:

• Mounting lens blanks and optical lenses securely in cutting, polishing, and grinding tools.
• Inspecting lens blanks to detect flaws, verify surface smoothness, and ensure proper coating thickness.
• Performing final inspections of mounted or unmounted lenses using precision instruments to verify alignment, specifications conformance, weight, and measurements.

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During my graduate studies, I had the opportunity to explore the captivating world of imaging technologies and their transformative applications in the field of biomedicine. Through a carefully crafted curriculum, I gained extensive knowledge and practical expertise in a diverse range of topics, spanning from cutting-edge imaging techniques to advanced biomedical instrumentation and bioimaging informatics. Immersed in this interdisciplinary journey, I honed my statistical skills and cultivated a keen understanding of how to derive valuable insights from complex biomedical data.

One of the highlights of the program was the freedom to tailor my studies through selectable major courses. I chose to specialize in areas that ignited my curiosity, such as programming for image analysis and innovative design thinking. These experiences provided me with a solid foundation in utilizing artificial intelligence and sophisticated visualization tools to process, interpret, and present intricate biomedical information effectively.

As I pursued my passion for merging technology and healthcare, I discovered the power of AI-driven imaging solutions in driving progress and revolutionizing patient care. The program not only expanded my technical prowess but also nurtured a profound appreciation for the profound impact of biomedical imaging on human well-being.

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My major coursework spanned a diverse array of intriguing subjects, enriching my understanding of the fundamental laws that govern the behavior of matter at the atomic and subatomic levels. The curriculum included essential courses such as Mathematical Methods for Physicists, Analytical Mechanics, Electronics, Electromagnetics, Quantum Mechanics, Acoustics, Signals, Semiconductors, and The Principles of Solid-State Physics, each contributing to the well-rounded knowledge base I possess.

Beyond the comprehensive academic experience, the programme also offered me a valuable opportunity to cultivate and refine my analytical thinking and problem-solving skills. Armed with this experience, I approach complex problems with a comprehensive and open-minded perspective, which allows me to examine issues from multiple angles, recognize the interconnectedness of various factors, and formulate well-considered solutions.

Overall, studying physics has taught me the value of perseverance and adaptability. Rather than being daunted by complexities, I have learned to embrace them as opportunities for growth and learning. This resilience, coupled with the ability to see the bigger picture, equips me to navigate through the most intricate of challenges with clarity and composure.

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